Showing posts with label Virology. Show all posts
Showing posts with label Virology. Show all posts

Sunday, 21 February 2021

Outbreak of Rift Valley Fever reported in Kenya.

The World Health Organization has reported an outbreak of Rift Valley Fever in Kenya, in Humans in Isiolo and Mandera counties and in Animals in Isiolo, Mandera, Murang’a and Garissa counties. As of 4 February 2021, there were a total of 32 human cases (14 confirmed positive), and 11 deaths (a case-fatality ratio of 34 %). 

The event is believed to have started on 19 November 2020, with deaths among herders presenting with symptoms of fever, headache, general malaise with or without nausea, epistaxis/hematemesis, and abdominal pain/diarrhoea reported to the County Department of Health in Isiolo. The first Human case was reported in late November 2020 from Sericho ward in Garbatulla Subcounty. Deaths have been reported in Gafarsa and Erisaboru within Garbatulla subcounty as well Korbesa in Merti subcounty. On 16 December, Rift Valley Fever was confirmed by polymerase chain reaction at the National Virology Laboratory of the Kenya Medical Research Institute. As of 4 February 2021, a total of 22 Human cases had been reported (12 confirmed positive), and 10 deaths (three confirmed positive). Most cases were from Garbatulla subcounty, with the majority being herders, male, and aged 13 to 70 years old.

Sheep and goats were also reported sick on 19 November 2020 in Sericho subcounty, which is mainly pastoral. The communities in this area live in villages and livestock are grazed in communal grazing areas. Animal samples tested immunoglobulin M and real time polymerase chain reaction positive for Rift Valley Fever at the Central Veterinary Laboratory in Kabete and the Regional Veterinary Investigation Laboratory in Garissa. The event was officially confirmed on 7 January 2021 and reported to the World Organisation for Animal Health on 15 January 2021 and later on 22 and 29 January 2021. As of 27 January, a total of 20 livestock samples (19 Sheep and 1 Camel) had tested positive for Rift Valley Fever by immunoglobulin M-capture enzyme-linked immunosorbent assay and real-time polymerase chain reaction.

A patient from Kalmalab village, Mandera North subcounty fell ill after he was involved in the slaughter of four sick Camels. He was evacuated to a Nairobi hospital with haemorrhagic symptoms on 18 January. He was later admitted to the Intensive Care Unit with multiple organ failure. Rift Valley Fever was confirmed on 21 January at the National Virology Laboratory. He died on 22 January 2021. As of 4 February 2021, a total of 10 cases (2 confirmed Rift Valley Fever positive), including 1 death had been reported from Mandera North sub county.

Kalmalab village borders the river Dawa which broke its banks following rains in the Ethiopian highlands. The Rift Valley Fever outbreak may be associated with this flooding, as it increases the risk of Mosquito-borne zoonosis. Livestock samples have been submitted to the Central Veterinary Laboratory in Kabete for testing.

Livestock with Rift Valley Fever syndromes (including bleeding and abortions) were first reported on 29 December 2020 in Gatanga subcounty, Kihumbuini ward. The first Animal death was reported on 1 January 2021. Samples were collected from the same farm on 1 January and were confirmed Rift Valley Fever positive on 3 January at the Central Veterinary Laboratory in Kabete using enzyme-linked immunosorbent assay immunoglobulin G/immunoglobulin M testing. More suspected Animal cases have been reported in Ng’araria ward in Kandara subcounty. No Human cases have been confirmed, however suspected cases were traced and samples from affected households were collected on 25 January for testing at National Virology Laboratory. 

Samples from suspected livestock (Sheep and Goats) were collected from Masalani, Ijara Subcounty and Balambala, Balambala Subcountrym on 20 December 2020 for testing and were confirmed positive for Rift Valley Fever on 22 December using enzyme-linked immunosorbent assay immunoglobulin M testing. Field investigations are ongoing to determine the extent of the outbreak.

Surveillance in livestock was initiated after the detection of the Rift Valley Fever outbreak in Isiolo. Outbreaks among Animals were observed during this time period. In December 2020, results from the Central Veterinary Laboratory in Kabete taken from 120 livestock revealed 20 (19 Sheep out of which 10 died, and 1 Camel) positive Rift Valley Fever cases confirmed by enzyme-linked immunosorbent assay immunoglobulin M testing. Further laboratory analysis are ongoing in both Human and livestock samples.

Rift Valley Fever is a Viral zoonotic disease that primarily affects Animals but also has the capacity to infect Humans. Infection can cause severe disease in both Animals and Humans. The disease also results in significant economic losses due to death and abortion among Rift Valley Fever-infected livestock. 

The Rift Valley Fever Virus is a member of the Phlebovirus genus in the order Bunyavirales, of segmented negative-strand RNA Viruses, the group which also includes Hantavirus (Leprosy) and Lassa Virus (Lassa Fever). 

 
A Phlebovirus Viron. Michèle Bouloy in Tidona et al. (2002).

The Rift Valley Fever Virus was first identified in 1931 during an investigation into an epidemic among sheep on a farm in the Rift Valley of Kenya. Since then, outbreaks have been reported in sub-Saharan Africa. In 1977 an explosive outbreak was reported in Egypt, the Rift Valley Fever virus was introduced to Egypt via infected livestock trade along the Nile irrigation system. In 1997–98, a major outbreak occurred in Kenya, Somalia and Tanzania following El Niño event and extensive flooding. Following infected livestock trade from the horn of Africa, Rift Valley Fever spread in September 2000 to Saudi Arabia and Yemen, marking the first reported occurrence of the disease outside the African continent and raising concerns that it could extend to other parts of Asia and Europe.

The majority of Human infections result from direct or indirect contact with the blood or organs of infected animals. The Virus can be transmitted to humans through the handling of animal tissue during slaughtering or butchering, assisting with animal births, conducting veterinary procedures, or from the disposal of carcasses or fetuses. Certain occupational groups such as herders, farmers, slaughterhouse workers, and veterinarians are therefore at higher risk of infection.  

The Virus infects Humans through inoculation, for example via a wound from an infected knife or through contact with broken skin, or through inhalation of aerosols produced during the slaughter of infected Animals.  

There is some evidence that humans may become infected with Rift Valley Fever by ingesting the unpasteurised or uncooked milk of infected Animals. Human infections have also resulted from the bites of infected Mosquitoes, most commonly the Aedes and Culex Mosquitoes and the transmission of Rift Valley Fever Virus by hematophagous (blood-feeding) Flies is also possible. To date, no human-to-human transmission of Rift Valley Fever has been documented, and no transmission of Rift Valley Fever to health care workers has been reported when standard infection control precautions have been put in place. There has been no evidence of outbreaks of Rift Valley Fever in urban areas.

 
The ecological cycle for the Rift Valley Fever Virus. Mosquitoes are both a reservoir and vector for Rift Valley Fever Virus, which means that they can maintain Virus for life and transmit it to their offspring via eggs. After periods of heavy rainfall and flooding, an increased number of Rift Valley Fever Virus-infected Mosquitos may hatch and pass virus to People and Animals. Humans become infected through mosquito bites and through direct contact with infected animal blood or tissue. Direct contact can occur during slaughtering of infected Animals and veterinary procedures. No Human-to-Human transmission has been documented. Centers for Disease Control and Prevention.

The World Health Organisation is working closely with the Kenyan Ministry of Health via the local health cluster alongside the Food and Agriculture Organization and World Organisation for Animal Health in supporting the Rift Valley Fever outbreak investigation (determining extent of the outbreak, associated risk factors, vector surveillance, and ecology mapping), as well as the raining of health care workers, raising awareness via radio spots, printing and dissemination of information, education and communication materials, building capacity of the county laboratories to carry out tests for Rift Valley Fever and other diseases, as well as a  range of other activities.

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Saturday, 30 September 2017

Iowa woman dies from West Nile Virus infection.

Health officials in Iowa have reported the death of a woman in the southwest of the state earlier this month. The woman has not yet been named, but has been described as being between 41 and 60 years of age. Iowa has recorded seven cases of the disease this year, with this being the first fatality; three other possible infections have been reported. In 2016 37 cases of infection with the Virus were reported in Iowa, with a single fatality.

West Nile Virus is a Mosquito-born Flavivirus (the group of RNA Viruses that also includes the Yellow Fever, Zika and Hepatitis C Viruses), first diagnosed in the West Nile District in Uganda in 1937, and subsequently reported in a number of African and Middle Eastern countries. The first case in the US was was reported in New York City in 1999, and it has subsequently been reported in every continental state of America. Outbreaks have also been reported in some European countries.

The West Nile Virus is a zoonotic infection, that principally infects Birds, and is transferred to Humans by Mosquitoes or occasionally Ticks. Infections have also been reported in a wide range of Mammal species, as well as in Crocodiles. Around 80% of infected Humans show no symptoms, with those who do generally suffering only a minor fever. However in a small number of cases the Virus infects the nervous system, causing a meningitis- or encephalitis-like infection that can often prove fatal. There is currently no known treatment for the Virus, making suppression and avoidance of Mosquitoes the best way to minimise fatalities from the disease.

Neural tissue infected by West Nile Virus. Brian Davies/University of Washington.

See also...

http://sciencythoughts.blogspot.co.uk/2017/09/state-of-emergency-declared-in-san.htmlhttp://sciencythoughts.blogspot.co.uk/2016/12/smallpox-virus-recovered-from.html
http://sciencythoughts.blogspot.co.uk/2016/12/first-case-of-locally-transmitted-zika.htmlhttp://sciencythoughts.blogspot.co.uk/2016/11/determining-origin-of-august-2016.html
http://sciencythoughts.blogspot.co.uk/2016/08/florida-state-department-of-health.htmlhttp://sciencythoughts.blogspot.co.uk/2016/02/estimating-role-of-temperature-in-sea.html
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Sunday, 3 September 2017

State of emergency declared in San Diego after Hepatitis A outbreak kills fifteen.

A state of emergency has been declared in San Diego County, California, on Friday 1 September, where an outbreak of Hepatitis A has killed fifteen people since November 2016 and hospitalised around four hundred more. The liver disease, which is spread through feaces, is not usually fatal in healthy individuals, but has caused a high number of fatalities in recent Californian outbreaks, when it has become established among populations of homeless people, who are often malnourished and/or immunocomprimised, making them particularly vulnerable. The declaration enebles San Diego to request assistance from the state authorities in California, and to enforce new sanitation measures. The city intends to provide new washing facilities in areas with high concentrations of homeless people, and to aquire specialist high-pressure cleaning equipment for removing blood and other bodily fluids from contaminated surfaces (measures that proved effectinve during a similar outbreak in Los Angeles), on top of a vaccination and education program already in place. These measures are likely to be adopted by neighbouring measures in South California in the near future.

A contractor installing a publich wash station in San Diego on 1 September 2017. Eduardo Contreras/The San Diego Union-Tribune/AP.

Hepatitis A is cuased by Hepatovirus A, a form of Picornavirales, non-enveloped isohedral RNA viruses about 30 nanometers in diameter, which are known to infect a variety of Vertebrates, Insects, Plants and Algae.

Electron microgaph of a Hepatovirus A Virus. Centers for Disease Control and Prevention/Wikimedia Commons.

Hepatitis A infects the Human liver, and often causes no symptoms in young, healthy individuals (though these can still pass the disease on). Individuals that do develop symptoms will typically suffer fever, nausea, vomiting, jaundice and abdominal pain, which can last for up to about eight weeks. Weaker individuals may suffer repeated bouts of symptoms, and in the worst cases acute liver failure, which is fatal without extreme medical intervention, such as a liver transplant.

See also...

http://sciencythoughts.blogspot.co.uk/2016/12/first-case-of-locally-transmitted-zika.html
http://sciencythoughts.blogspot.co.uk/2016/12/smallpox-virus-recovered-from.html

http://sciencythoughts.blogspot.co.uk/2016/08/florida-state-department-of-health.html
http://sciencythoughts.blogspot.co.uk/2016/11/determining-origin-of-august-2016.html
http://sciencythoughts.blogspot.co.uk/2016/01/sierra-leone-reports-new-case-of-ebola.html
http://sciencythoughts.blogspot.co.uk/2016/02/estimating-role-of-temperature-in-sea.html

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